file.exists

file.exists methods

file.exists,BamFile-method

a <code><links4class>BamFile</links4class></code> object

Check if the bam file represented by a <code><links4class>BamFile</links4class></code> object exists.

methods

Calculates the coverage of high-throughput short-reads against
    a genome of reference and summarizes it per feature of interest (e.g. exon,
    gene, transcript). The data can be normalized as 'RPKM' or by the 'DESeq'
    or 'edgeR' package.

Nicolas Delhomme

easyRNASeq

Count summarization and normalization for RNA-Seq data

file.exists methods function

a <code><linkS4class>BamFile</linkS4class></code> object

Check if the bam file represented by a <code><linkS4class>BamFile</linkS4class></code> object exists.

file.exists methods: Extend the file.exists function to check the path slot of a Rsamtools BamFile class for existence

Description

Usage

Arguments